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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4371763 chr5:45983222 A/G LOC647121 chr1:121260910-121313686:+ 0.38 7.98 1.11E-14 Box Plot
THCA rs4371800 chr5:49521183 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.69 8.2E-14 Box Plot
THCA rs4371917 chr7:144159358 A/G OR2A4 chr6:132021609-132022541:- -0.4 -6.17 1.5E-9 Box Plot
THCA rs437470 chr21:18937758 A/G CXADRP3 chr18:14477954-14499277:- 0.64 9.78 1.02E-20 Box Plot
THCA rs4380288 chr2:132272800 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.1E-12 Box Plot
THCA rs4380369 chr3:125821655 A/C ROPN1 chr3:123687368-123711025:- -0.34 -6.14 1.7E-9 Box Plot
THCA rs4382179 chr5:43725596 C/A UQCRC1 chr3:48636435-48648409:- -0.35 -6.18 1.37E-9 Box Plot
THCA rs4383730 chr5:46050992 C/G LOC647121 chr1:121260910-121313686:+ 0.38 8.11 4.25E-15 Box Plot
THCA rs4385389 chr7:140135435 C/T LOC441455 chr9:99488103-99489749:+ 0.51 6.82 2.71E-11 Box Plot
THCA rs4387923 chr3:125794253 A/G ROPN1 chr3:123687368-123711025:- -0.34 -6.23 1.01E-9 Box Plot
THCA rs4388219 chr5:45780750 C/T LOC647121 chr1:121260910-121313686:+ 0.29 6.02 3.57E-9 Box Plot
THCA rs4389698 chr5:46051668 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.34E-15 Box Plot
THCA rs439192 chr4:112024192 A/C C9orf131 chr9:35041092-35045988:+ 0.29 5.94 5.56E-9 Box Plot
THCA rs4394301 chr7:33049584 C/T FKBP9L chr7:55748767-55780945:- -0.56 -14.46 1.44E-39 Box Plot
THCA rs4394351 chr8:11212875 G/C SGK223 chr8:8175258-8244008:- -0.36 -6.62 9.81E-11 Box Plot